Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015812182.1_cds_XP_016497036.1_11206
CDS Infomation

[gene=LOC107815901] [db_xref=GeneID:107815901] [protein=3-phosphoshikimate 1-carboxyvinyltransferase, chloroplastic-like] [partial=3'] [protein_id=XP_016497036.1] [location=join(43311..43625,44676..44920,45066..45219,46251..46465,46547..46664,47138..>47287)] [gbkey=CDS]
Sequence

ATGGCACAGATTAGCAAGATGACACAAGGGATACAAACCCTTTATCCCAATTCCAATATT
CATAAACCCCAAATTCCCACATTTTCACCTTCTCTTTCCTTTGGATTGAAAAATTCAGCA
AAATCTATGTGGGTCTTGAACAAAGATTCATTCTTGAAAAAAGATTCAATTTTTAGGATT
TCAGCATCACTGGCTACAACACAGAAACCCAATGAGATTGTTCTGCAACCAATTACAGAG
ATATCTGGCACTGTTAAATTGCCTGGCTCTAAATCCTTATCCAATCGTATTCTCCTTCTT
GCTGCCCTCTCTGAGGGAACAACTGTTGTTGACAATTTACTTAGTAGTGATGATATTCAT
TACATGCTTGGTGCGTTGAAAACACTTGGACTGAATGTAGAAGAAGACAGCGCAAACCAA
CGAGCAACTGTTGAAGGTTCTGGTGGGCTATTCCCTGTTGGTAAAGAGTCCAAGGAAGAA
ATTCAACTTTTTCTTGGAAATGCAGGAACTGCAATGCGGCCACTAACAGCAGCCGTTGTT
GTAGCTGGCGGAAATTCAAGGTATGTACTTGATGGAGTTCCTCGAATGAGAGAGAGACCA
ATTGGTGATTTGGTTGATGGTCTTAAGCAACTTGGTGCAGAGGTTGATTGTTTCCTTGGT
ACGAAATGTCCTCCTGTTCGAATTGTCAGCAAGGGAGGTCTTCCCGGAGGGAAGGTGAAG
CTCTCTGGATCCATTAGCAGCCAATACTTGACTGCTCTCCTTATGGCTGCTCCACTGGCT
TTAGGAGATGTGGAGATTGAAATCATTGACAAACTAATTTCCGTACCTTATGTCGAAATG
ACATTGAAGTTGATGGAGCGATTTGGTATTTCTGTGGAGCACAGTAGTAGCTGGGACAGG
TTTGTTGTCCGAGGAGGTCAGAAATACAAGTCTCCTGGAAAAGCTTATGTAGAAGGCGAT
GCTTCAAGTGCTAGCTACTTCTTGGCTGGAGCGGCCGTCACAGGTGGAACTATCACTGTT
GAAGGTTGTGGGACAAGCAGTTTACAGGGGGATGTCAAATTTGCTGAGGTTCTTGAGAAA
ATGGGAGCAGAAGTTACTTGGACAGAGAACAGCGTCACAGTCAAAGGACCACCAAGGAAT
TCTTCTGGAATGAAGCATTTGCGTGCCATTGATGTGAACATGAATAAAATGCCTGAT

Peptide Sequence

PEP ID

XP_016497036.1
PEP Infomation

PREDICTED: 3-phosphoshikimate 1-carboxyvinyltransferase, chloroplastic-like, partial [Nicotiana tabacum]
Sequence

MAQISKMTQGIQTLYPNSNIHKPQIPTFSPSLSFGLKNSAKSMWVLNKDSFLKKDSIFRI
SASLATTQKPNEIVLQPITEISGTVKLPGSKSLSNRILLLAALSEGTTVVDNLLSSDDIH
YMLGALKTLGLNVEEDSANQRATVEGSGGLFPVGKESKEEIQLFLGNAGTAMRPLTAAVV
VAGGNSRYVLDGVPRMRERPIGDLVDGLKQLGAEVDCFLGTKCPPVRIVSKGGLPGGKVK
LSGSISSQYLTALLMAAPLALGDVEIEIIDKLISVPYVEMTLKLMERFGISVEHSSSWDR
FVVRGGQKYKSPGKAYVEGDASSASYFLAGAAVTGGTITVEGCGTSSLQGDVKFAEVLEK
MGAEVTWTENSVTVKGPPRNSSGMKHLRAIDVNMNKMPD

Transcript Sequence

Gene sequence data has not been registered.